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Pumpkin Cream Cheese Muffins

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Pumpkin Cream Cheese Muffins are perfectly spiced with cinnamon, ginger, and nutmeg- add orange zest to the mix, then top with a delicious walnut streusel and these baked beauties are elevated to a new level of irresistible goodness.

close up of pumpkin muffin with cream cheese with a bite taken out of one. Muffins and a baking tin in the background. Streusel on top

Pumpkin Cream Cheese Muffins are sure to become a favorite for you and everyone you share them with. It’s nothing new that recipes made using pumpkin are super popular during the fall and holiday season and it’s no wonder! Just the color of baked goods made with pumpkin reminds us of the changing season. Also, pumpkin is frequently paired with cinnamon which has such a distinct flavor reminiscent of cooler weather and indoor family gatherings, hello Christmastime! This recipe does all that and more…

pumpkin cream cheese muffins on a cooling rack. Baking tin in background with streusel.Moist and beautiful thanks to the pumpkin puree, perfectly spiced thanks to a good dose of cinnamon in addition to ground ginger, and fresh nutmeg; but then to bring everything forward in abundant flavor, orange zest is is used in this recipe to bring brightness to the muffins for the perfect balance with the deep spices. A hint of citrus makes all the other flavors come alive and taste even fresher. The sweetened cream cheese in the center is a fun trick, but if you don’t want to bother with it the muffins still taste fantastic without it. That’s my opinion even though I had others tell me the cream cheese was absolutely necessary. So, it’s a good thing baking the cream cheese in the muffins is super easy. Also, let’s not forget the streusel topping made with ground walnuts, sugar, flour, and butter for just the right amount of sweet crumb.

pumpkin muffin with cream cheese in the middle, bite take out of it. walnut streusel on top

Ingredients for Pumpkin Cream Cheese Muffins-

  • All-purpose flour (I’ve subbed in equal amounts of almond flour and whole wheat flour before as well)
  • Baking powder and baking soda – Using both baking powder and baking soda helps to make these muffins rise nicely.
  • Spices – Cinnamon, ground ginger, and freshly ground nutmeg (If possible, start grinding whole nutmeg yourself whenever a recipe calls for this spice. The difference noticeable).
  • Orange zest – This ingredient is the key to this recipe, I promise. The brightness from the orange zest enhances all the spices and the pumpkin.
  • Cream cheese – As with all baking recipes, using the best you can afford is important. I stand by Philadelphia or Trader Joe’s.
  • Salt – Salt is so important to make a recipe not taste bland and flat. Unless you’re on a strict diet limiting salt, don’t cut back on it.
  • Pumpkin puree – Make sure you use canned pumpkin puree and not canned pumpkin pie filling. Pie filling is already spiced and sweetened.
  • Granulated sugar – The amount of sugar listed in this recipe is perfect for that sweet treat, but you can actually reduce it and even leave it out if needed. If you leave out the sugar, the flavor is quite plain but they’re still tasty and look fantastic. If you’re set on cutting out a lot of the sugar, I get it, I try to do that often too. I’d still add 3/4 cup at the minimum, which is not much per muffin.

Looking at muffins and cupcakes that are filled with cream cheese or other soft filling can seem difficult to achieve but it’s not hard at all. See the photos and instructions below-

four pictures of how to layer the pumpkin muffins. Clockwise from top left, two tablespoons batter in tin; cream cheese on batter; batter on top of cream cheese layer; streusel on top

How to fill pumpkin muffin batter with cream cheese-

  • Fill each muffin cup with just enough batter to cover the bottom, about two tablespoons.
  • Drop a two teaspoon-size of sweetened, chilled, cream cheese over the top of the batter.
  • Then cover the cream cheese with another generous two tablespoons of batter to completely cover the cream cheese so it stays inside the muffin as they bake.
  • Top with about a tablespoon of streusel mixture over the top of the muffins before baking.

close up of pumpkin cream cheese muffin with bite out of it. streusel on top

How to bake muffins so the tops rise nicely, especially if you live in altitudes over 4,000 feet-

Bake the muffins for 4 minutes at 400°F, during this time the muffins will rise quite a bit. After 4 minutes, turn the oven temperature down to 350°F for the remainder of the baking time, approximately 16-19 minutes or until a toothpick gently pricked into the top of a muffin comes out mostly clean. If the streusel topping starts to brown too much, carefully place a sheet of aluminum foil over the muffins for the remaining time. This may happen during the final 7-8 minutes.

pumpkin cream cheese muffins just coming out of the oven in a muffin tin.

So there you have it. The Pumpkin Cream Cheese Muffins have become a friend and family favorite but be sure to check out all the pumpkin recipes here. A couple of my personal favorites are Pumpkin Truffles and Pumpkin Alfredo Sauce with Kale and Pasta.

close up of pumpkin cream cheese muffin with bite taken out of it. muffins in the back with baking tin. streusel on top
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5 from 11 votes

Pumpkin Cream Cheese Muffins

Pumpkin Cream Cheese Muffins are so easy with step-by-step instructions and notes below. Tips for making sure the muffin tops rise, especially for high altitude baking. You can choose to leave out the cream cheese filling and they'll still be incredible.
Course Dessert
Cuisine Dessert
Keyword cream cheese, muffins, pumpkin
Prep Time 20 minutes
Cook Time 25 minutes
Total Time 45 minutes
Servings 15 muffins
Calories 253
Author Sally Humeniuk

Ingredients 

For the Cream Cheese Filling:

  • ½ cup cream cheese, softened
  • ¼ cup granulated sugar
  • ½ tsp orange zest
  • 1 tsp vanilla extract

For the Walnut Streusel Topping:

  • ¼ cup walnuts, finely chopped
  • ½ cup flour
  • ⅓ cup granulated sugar
  • 3 tbsp butter, melted

For the Pumpkin Muffins:

  • 2 cups all-purpose flour
  • 1 tsp baking powder
  • 1 tsp baking soda
  • ½ tsp salt
  • 1 tsp ground cinnamon
  • 1 tsp ground ginger
  • ½ tsp nutmeg, freshly ground preferred
  • 1 ¼ cup granulated sugar
  • 1 ¼ cup canned pumpkin puree
  • 3 large eggs, room temperature
  • ⅓ cup canola oil, or other neutral flavored oil like avocado.
  • 1 ½ tsp orange zest

Instructions

Prepare the Cream Cheese Filling:

  • Mix together ½ cup cream cheese, ¼ cup sugar, ½ teaspoon orange zest, 1 teaspoon vanilla until smooth. Put in refrigerator until needed in the recipe.

Make the Walnut Streusel:

  • Mix together ¼ cup walnuts, ½ cup flour, ⅓ cup sugar, and 3 Tablespoons butter until the mixture resembles coarse sand with several pea size crumbs in it. Set aside.

Prepare the Pumpkin Muffin batter:

  • Preheat oven to 400°F. Place oven rack one place above center. Line a muffin pan with muffin tin liners. See notes below regarding oven temperatures needed for successful muffins.
  • In a medium bowl, whisk together 2 cups flour, 1 teaspoon baking powder, 1 teaspoon baking soda, ½ teaspoon salt, 1 teaspoon cinnamon, 1 teaspoon ginger, and ½ teaspoon freshly ground nutmeg.
  • In a large bowl, add 1 ¼ cup granulated sugar, 1 ¼ cup pumpkin puree, 3 large eggs, ⅓ cup canola oil, and 1 ½ teaspoons orange zest.
  • Mix in flour mixture until just incorporated. Make sure all the dry ingredients are absorbed and not showing, but don't mix more than that.
  • Add about 2 Tablespoons batter to the bottom of each muffin cup, just enough to cover the bottom. Place about 2 teaspoon-size balls of the cream cheese filling to the center of each muffin cup. Then add another generous 2 Tablespoons batter to cover the cream cheese.
  • Sprinkle 1 tablespoon streusel on top of each muffin. You will have quite a bit of streusel left over.

To bake the muffins with high, bakery style tops, or for high altitudes:

  • Bake the muffins for 4 minutes at 400°F, during this time the muffins will rise quite a bit. After 4 minutes, turn the oven temperature down to 350°F for the remainder of the baking time, approximately 16-19 minutes or until a toothpick gently pricked into the top of a muffin comes out mostly clean. If the streusel topping starts to brown too much, carefully place a sheet of aluminum foil over the muffins for the remaining time. This may happen during the final 7-8 minutes.
  • Remove muffins to a cooling rack and let cool for at least 20 minutes for the muffins to remain intact when opening, but to be able to serve slightly warm. They're incredible warm! If they're completely cool, you could heat in the microwave about 5-7 seconds.

If you don't live at altitude or don't care if your muffins rise super high:

  • Bake the muffins at 350°F for 21-25 minutes, until the tops are golden brown and a toothpick comes out mostly clean. The muffins will rise but may not get that bakery high peak. This method requires less muffin-sitting to watch them as they bake.
  • Remove muffins to a cooling rack and let cool for at least 20 minutes for the muffins to remain intact when opening, but to be able to serve slightly warm. They're incredible warm! If they're completely cool, you could heat in the microwave about 5-7 minutes just enough for warm delights.

Storing leftover muffins:

  • Store any leftover muffins in airtight container in the refrigerator due to the cream cheese center. Muffins will keep an additional two days after baking.

Equipment

Medium bowls
Large bowl
Muffin tin
Muffin Tin Liners

Notes

  1. Regarding the above directions for how to bake your muffins- after much experimentation, living at over 8,000 ft altitude, in order for me to ensure that my muffin tops rose nicely rather than spreading, I had to start at the higher temperature and reduce once the muffin tops rose. If you don't want to bother with having to watch the muffins so much as they bake, start at 350 degrees and let them bake until golden. The tops may be more flat, but they're still lovely.
  2. You may use up all the cream cheese filling for the first 12 muffins and then the remainder of batter will make 3 regular muffins. If you prefer to make all the muffins without the cream cheese center, they're fantastic without, fill the cups to 3/4 full and bake at 350F degrees for 20-25 minutes. 
  3. I've made this recipe replacing the all-purpose flour with 1 cup almond flour and 1 cup whole wheat flour. They're delicious and even more moist this way. The almond flour/whole wheat flour muffins are best eaten within a day of baking for optimal flavor.
  4. If your muffins fall in the center, the reasons are usually - A) Overfilling the muffin cups and baking at too low a temperature so the tops have no where to go after baking but down. B) Not baking the muffins long enough and the moist centers fall in. If this happens, an easy fix will make the muffins look nicely done- add leftover streusel to the centers to fill in the gap.
Nutrition Facts
Pumpkin Cream Cheese Muffins
Amount Per Serving (1 muffin)
Calories 253 Calories from Fat 63
% Daily Value*
Fat 7g11%
Saturated Fat 3g19%
Trans Fat 1g
Polyunsaturated Fat 1g
Monounsaturated Fat 2g
Cholesterol 52mg17%
Sodium 211mg9%
Potassium 129mg4%
Carbohydrates 43g14%
Fiber 1g4%
Sugar 26g29%
Protein 4g8%
Vitamin A 3405IU68%
Vitamin C 1mg1%
Calcium 38mg4%
Iron 2mg11%
* Percent Daily Values are based on a 2000 calorie diet.

close up of pumpkin cream cheese muffin. text at top reads pumpkin muffins with streusel and orange zest

 

two pictures of pumpkin muffins with cream cheese. text at top reads pumpkin pumpkin pumpkin. text at bottom reads gooddinnermom.com

 

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Published on October 21, 2021

Comments

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    Recipe Rating




  1. Tessa Rees says

    October 9, 2022 at 12:46 PM

    Seriously the best pumpkin muffins you will ever taste! Recipe is so easy to follow and the tips on how to make the muffin tops bigger were awesome! Sally has done it again.

    Reply
    • Sally Humeniuk says

      October 10, 2022 at 10:21 AM

      This is the best compliment, thanks so much, Tessa! And these muffins are this good, in part, due to your help during recipe development. 🙂

      Reply
  2. Shaylynn p says

    August 23, 2022 at 7:06 AM

    5 stars
    Made these over the weekend ’cause my family is too excited for Fall to be here next month and they were a hit! My 8 Y/O loved the filling and the topping was her favorite part. This is going in the recipe book! Thanks for sharing Sally 🙂

    Reply
    • Sally Humeniuk says

      August 24, 2022 at 10:30 AM

      Shaylynn, this is awesome! I can’t wait for fall either and I will agree that this recipe is a good one for getting all the “pumpkin spice” feels. 🙂

      Reply
  3. mable strochein says

    April 9, 2022 at 9:31 AM

    5 stars
    These muffins turned out delightfully delish. Really tasty! I thought they may end up more cupcake like but they didn’t. very comforting.

    Reply
  4. emma says

    April 9, 2022 at 9:28 AM

    5 stars
    Making these AGAIN this weekend and cant wait! Pumpkin isn’t just for Fall its an all-year-around treat for me! Fall is too far away 🙂 Thanks Sally!

    Reply
    • Sally Humeniuk says

      April 10, 2022 at 9:53 AM

      Emma, I couldn’t agree with you more!

      Reply
  5. stephanie pitcher says

    April 6, 2022 at 6:49 AM

    5 stars
    These muffins turned out great! I LOVE muffins with a crumb topping.

    Reply
  6. kinley b says

    April 6, 2022 at 6:37 AM

    5 stars
    Have you tried freezing these yet? I’m asking because I’m thinking of doubling the recipe to use the whole can of pumpkin. I make your spinach banana muffins ALL the time, I can’t wait to try these! Thank you Sally!

    Reply
    • Sally Humeniuk says

      April 7, 2022 at 8:10 AM

      Hi Kinley, first of all, thank you for trying multiple recipes on my site! I haven’t tried freezing the pumpkin cream cheese muffins but thing they’d freeze just fine. I’d say to be sure to thaw them out a little longer before eating, even after the outside seems ready to enjoy. To give the cream cheese maybe an extra hour to soften. Let me know if you do freeze them how they work out. Thanks again, Kinley!

      Reply
  7. Shelli c says

    January 14, 2022 at 7:07 AM

    5 stars
    These were delicious! Taste just like Starbucks but without the cost! I love that now I can make my own at home. My family loved them and my daughters asked for the recipe! Im so glad you shared this recipe!

    Reply
  8. Ava G says

    January 14, 2022 at 6:30 AM

    5 stars
    These are so easy and delicious! The topping is to die for and I loved the cream cheese in the middle! Do you think they’ll freeze well?

    Reply
  9. Bonnie says

    January 12, 2022 at 9:20 AM

    5 stars
    Who doesn’t want pumpkin muffins in their life?! I know I do! Plus all the Streusel topping and cream cheese in the middle how can you go wrong !!

    Reply
  10. Courtney says

    January 12, 2022 at 6:56 AM

    5 stars
    I make these often. I love how easy they are. Im often complimented on how good the pumpkin and cream cheese taste together. Thank you Sally!

    Reply
  11. Jaclyn says

    January 11, 2022 at 4:51 PM

    5 stars
    Your recipes are always simple yet gorgeous! Recently made this particular muffin and it has become a favorite! Thank you!

    Reply
  12. Jackielynn says

    November 2, 2021 at 3:29 PM

    5 stars
    I might make these for Thanksgiving instead of pumpkin pie They look and sound so good! Thank you for the recipe 🧡

    Reply
    • Sally Humeniuk says

      November 4, 2021 at 11:50 AM

      They’re so delicious, Jackielynn. I hope you like them!

      Reply
About Sally - Good Dinner Mom.

About Good Dinner Mom

My name is Sally and I love to be in the kitchen. Making fresh, unique dishes is my way of showing love for family and friends and I hope that here you’ll find recipes of both healthy and indulgent dishes that will inspire you to cook more at home while sharing some love of your own. more about me

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